CDS

Accession Number TCMCG016C17374
gbkey CDS
Protein Id OMO71121.1
Location join(30950..31105,31841..32551,33003..33209,33316..33624,34041..34168,34700..34791,35405..36539,36798..36939,37052..37211,37403..37566,39527..39588,40022..>40181)
Organism Corchorus capsularis
locus_tag CCACVL1_18439

Protein

Length 1142aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01011704.1
Definition Spc97/Spc98, partial [Corchorus capsularis]
Locus_tag CCACVL1_18439

EGGNOG-MAPPER Annotation

COG_category Z
Description Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K16573        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000226        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000923        [VIEW IN EMBL-EBI]
GO:0000930        [VIEW IN EMBL-EBI]
GO:0000931        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005200        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005813        [VIEW IN EMBL-EBI]
GO:0005815        [VIEW IN EMBL-EBI]
GO:0005816        [VIEW IN EMBL-EBI]
GO:0005822        [VIEW IN EMBL-EBI]
GO:0005825        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006928        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007017        [VIEW IN EMBL-EBI]
GO:0007018        [VIEW IN EMBL-EBI]
GO:0007020        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007051        [VIEW IN EMBL-EBI]
GO:0007052        [VIEW IN EMBL-EBI]
GO:0007097        [VIEW IN EMBL-EBI]
GO:0007098        [VIEW IN EMBL-EBI]
GO:0007163        [VIEW IN EMBL-EBI]
GO:0008017        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008274        [VIEW IN EMBL-EBI]
GO:0008275        [VIEW IN EMBL-EBI]
GO:0008360        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0015631        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0022604        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031021        [VIEW IN EMBL-EBI]
GO:0031023        [VIEW IN EMBL-EBI]
GO:0031109        [VIEW IN EMBL-EBI]
GO:0031122        [VIEW IN EMBL-EBI]
GO:0032153        [VIEW IN EMBL-EBI]
GO:0032155        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034453        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034631        [VIEW IN EMBL-EBI]
GO:0043015        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044450        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044732        [VIEW IN EMBL-EBI]
GO:0046785        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051225        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051258        [VIEW IN EMBL-EBI]
GO:0051298        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051415        [VIEW IN EMBL-EBI]
GO:0051418        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051647        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051656        [VIEW IN EMBL-EBI]
GO:0061496        [VIEW IN EMBL-EBI]
GO:0061497        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071957        [VIEW IN EMBL-EBI]
GO:0071963        [VIEW IN EMBL-EBI]
GO:0072393        [VIEW IN EMBL-EBI]
GO:0090307        [VIEW IN EMBL-EBI]
GO:0097435        [VIEW IN EMBL-EBI]
GO:0098863        [VIEW IN EMBL-EBI]
GO:0099098        [VIEW IN EMBL-EBI]
GO:0099111        [VIEW IN EMBL-EBI]
GO:0140014        [VIEW IN EMBL-EBI]
GO:1902850        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1990734        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGTGGAAACGAATTTCGCATCGCTGTTTGAGAAGCTAAAAGTGGGAGATCCATGGCTACCTCCTCGAACCTGGGAATCCATTCCTTCTCAGAGCGGCCCTCCTACTCCACCCGCCTCTCATACTCACATTTCCTCTTCTTCATCTGTCTCCGAGTCTAGTTTGGTGAGGTTGGCATTGAATGCACTGCAAGGTGTAGAATCATCTCTAATTAGTATAGAAAAGCTTTCTGCTGCCTTTTGTTCTGATCCTGCAGATAGGACTTTCCATCAAACACCCAGTCTTTGGAACCGATCTTCAAGCACTCACGCTCTTGGAAATATTCTTAAATCGATAGGCCGCTTGGGTTTCTTAGTTTTCCTTCTCAATAAGTTTGTAGATTATTTCAAGAATTTGAATCTCAATGGAAAGTCATATCCGTTAGGAAAGAGCCACGGAAATTCTCAAGCAGCAGGGAATCAAAATTATGGTGGCCACGAAATGCAAGAGAAAGACGGTCCTAGATACAGCCTTGTTAATCAGGCCTTCTCTGTTGCTGTGGGAAAGGTTTTGCAAGGGTACATTTGTGCGCTGGACTCATTATATGCATCGGTAAATTTAAGGCGTTCATCAGAGAATGTTGAAGTCTCTTCTGGCTGTCTTACTAGTGTAGTTTACTCTGAAGTTACACTATTGGAGGTATATCTGCACACAAAGGAATTGAGGACCCAGATCGAAGCTCTTGGGAACATATGCAACCTGCATGATCTAGCTCTTTGCTTCTTCGAATTTTCTTTTGAGGAGCTAACTTACAAAGCAACCATGGAATTTCATAATTTCTACAGGGGAGCTGACCTGCTTAGCTACTTGTATAGACAATTAAAGGTTGTGGACCCTGCTCATAGTGCTTTACTCAAGTTTCTCTTTCTTCGGTCATGTGAACCATATTGTGAATTTATAAGGTCATGGATATTTAAAGCTGAGATCAATGATCCTTATAAAGAGTTTGTAGTAGAATACATTGACAAGTTACAACAGTATTCCTTTGGTAAAGTTGGCATCTCAATTGACTTTCCTGTGGCAAGTATCAAGCGGGACGGAGTTGGTGTTCCATGTTTTCTGAAGGATGTTTTAATTCCACTTGTCAGAGCTGGCCAGCAGCTTCAAGTTCTAATGAAATTGCTTGAATTCCGTAAATATGTTGACTGTGGAGACCATACTTATTCAGATTTTCTTCCATGCTGGAGTGGTTTTGCGGGCAGTCATTCTTTCTATGCATCTTCAATCACTTTTGGCAAAGAAAATATAGAAGCCTTGGTTCTCAGGAGGAATAGTTACTACGAGAGGATACAGGAGAAACTTGAAACCTTTCTGACAGGGTTGGAATTTAGTTATCAACAGGTCATTTTCCATGGTGCTGAATCTCTTTTTGTTGGTAATGGTGGAGGCAGTGTAAATACTGCAGCTTCACTCACAGTGGATGACAAATTGGTCGTTACTTCAACGGCTCAACAGAGTGTCTCAAACGTTGATAGCCATATGCTCACCCTAATTGACCGGTTGCAGGTCTCCATTGCATTTGAAAGAGCAGTTTTGCTCCTTGGTGCAACCTCAAAAGAGCGCCTTTTGATGATAATGCACTCTAGTACAAAAGATGGGTCCTGTTATTCCGACATCTTTGAATCTTCATCAGTGAGTAGTCTTGAAGAACAAATTGAGACAGAGCAGTTGATTGAACACCATAATGATTCAGTTTGGCCTAAACAAAATTATTTCTCTGCACTAAGCTTTTCCATCAGTACCGCGACAGACAACTCATTCCAACACACTTTGCAAAATGAAAATTCTTACAACATGGAAAGTGGTTCCCAGGAATTTTCTGAAGGAAGACATGGCCCTGCCAATTTTATAGGTCCTGAATCGAATGGGATAATGTATGACCATAAATCTGCGCACCTTGAGTCAAACTGCTTGTGTGCGGAAGCTGAATTTGCGGATATTCTACCTTACAAGGGCTGGCCAATTGACAGTGCAAGGGGTAATGCTTTTTACATTGATGCAGGCTTTAGACATGCTAATAGGTTACATGTGTCTGGATCTGACAAAAAAATGATTGCAGGTCATATGCAATTTCCTGATAAAGTTGTGCAAGATTTTAATGAATCAATTGCTTGCGGCGATACTTCAATAATGGACACCACAAATGAAGATGAACTTGAAAAGAATTATACTTCTCAGTTATTTCACTTGCAACCACCCAAGCTTGGTTACAATGGCAGCCTTCTCAGCAAAAACCCAATGTTGTCAAAAAATGTTATTTTCCGCATGATGAGCATGCCTAGTGACTCAAGCTGCATGAAATACCAAAAATCTTTACCTTGCTTTGATTTTTCTTCAGTGAATGACCCTTGTAAGGTTTATATCAAAAGACTCAATGCTGGGCTTACACACGAATTACCTGAGAGTACCAGTTCTTCTCTGATAAATGTTAATAAGCAAAGCTATGGAGGAGATGTTCTCTTGGTTGACAATGCAAAGGTTTCTCATGCTGCACCTCCAACTTTTGAGTTAAAGAACCAAAATCAAGATATCATTCCAACTGTTTCTGGCGGGAGGTATTGGCAGAGTTTGCTTGGTTGTTCTAGCACCCCTAATATTAGTGGGATTGGAGATGTCAAGCTGAATAAATCTTCTATGTTTGAGATACCACTTGATTTTGTTATTGACAAATGCCTACTGCAGGAAATCTTGCTTCAATATAACTATGTCAGCAAGTTAACCATCAAGTTTCTCGAAGAAGGTTTTGATTTGCAAGAACATTTGCTAGCGCTAAGGCGATACCACTTCATGGAACTGGCAGACTGGGCAGATTTGTTTATTATGTCCCTCTCGCGTCATAAATGGTGCATTACAGAGGTGGATCGAAGACTCTCTGAAATTCAAACACTCCTTGAGTTGTCAGTCCAGAGGTCATCTTGTGAAAAAGACCATCATAAAGATAGGTTAGTTGTGTATGCAAAAGGACGTGGATTGATGCCTCTTTCAACTTCAACAATTGGTGTGCATTCCTTTGACTTTCTAGGTCTGGGCTACCGAGTGGACTGGCCTGTTAGTCTTATTTTGACTCCTGGTGCATTGAAAATATATGCTGATATATTCAACTTTCTGATACAATTGAAGCTTGCTGTTTTTTCATTGACTGATGTATGGTGCTCTTTAAAGGTCAAGGATATAATGGATCTTGAGTCAGTCCATATGGCATATCTAACCGATTCACTACATATATGCTTTCTCTCTGATGAAACACAACCGGTAGCCAGCATCATAGAAAATATTTTGCAGTGTGCCTTAGACTTCCGATCTTGTATTGCCGGGGGTATATGGAATGTGGGACTTGCCGAATGCGATTTATTGGAGAAAATTTCTAGGATCAATATATCCCAG
Protein:  
MAVETNFASLFEKLKVGDPWLPPRTWESIPSQSGPPTPPASHTHISSSSSVSESSLVRLALNALQGVESSLISIEKLSAAFCSDPADRTFHQTPSLWNRSSSTHALGNILKSIGRLGFLVFLLNKFVDYFKNLNLNGKSYPLGKSHGNSQAAGNQNYGGHEMQEKDGPRYSLVNQAFSVAVGKVLQGYICALDSLYASVNLRRSSENVEVSSGCLTSVVYSEVTLLEVYLHTKELRTQIEALGNICNLHDLALCFFEFSFEELTYKATMEFHNFYRGADLLSYLYRQLKVVDPAHSALLKFLFLRSCEPYCEFIRSWIFKAEINDPYKEFVVEYIDKLQQYSFGKVGISIDFPVASIKRDGVGVPCFLKDVLIPLVRAGQQLQVLMKLLEFRKYVDCGDHTYSDFLPCWSGFAGSHSFYASSITFGKENIEALVLRRNSYYERIQEKLETFLTGLEFSYQQVIFHGAESLFVGNGGGSVNTAASLTVDDKLVVTSTAQQSVSNVDSHMLTLIDRLQVSIAFERAVLLLGATSKERLLMIMHSSTKDGSCYSDIFESSSVSSLEEQIETEQLIEHHNDSVWPKQNYFSALSFSISTATDNSFQHTLQNENSYNMESGSQEFSEGRHGPANFIGPESNGIMYDHKSAHLESNCLCAEAEFADILPYKGWPIDSARGNAFYIDAGFRHANRLHVSGSDKKMIAGHMQFPDKVVQDFNESIACGDTSIMDTTNEDELEKNYTSQLFHLQPPKLGYNGSLLSKNPMLSKNVIFRMMSMPSDSSCMKYQKSLPCFDFSSVNDPCKVYIKRLNAGLTHELPESTSSSLINVNKQSYGGDVLLVDNAKVSHAAPPTFELKNQNQDIIPTVSGGRYWQSLLGCSSTPNISGIGDVKLNKSSMFEIPLDFVIDKCLLQEILLQYNYVSKLTIKFLEEGFDLQEHLLALRRYHFMELADWADLFIMSLSRHKWCITEVDRRLSEIQTLLELSVQRSSCEKDHHKDRLVVYAKGRGLMPLSTSTIGVHSFDFLGLGYRVDWPVSLILTPGALKIYADIFNFLIQLKLAVFSLTDVWCSLKVKDIMDLESVHMAYLTDSLHICFLSDETQPVASIIENILQCALDFRSCIAGGIWNVGLAECDLLEKISRINISQ